Calibration of genetic effect from founder population data

Calibration of genetic effect from founder population data

Usage

gen_effect_calibration(
  founder_object,
  taxa_assign_g,
  correlation = 0.5,
  effect.size = c(seq(0.1, 1, 0.1)),
  plot = T
)

Arguments

founder_object

Output of generate_founder() function

taxa_assign_g

Factor vector giving cluster assignment for all taxa, typical output of assign_taxa()

correlation

Correlation between taxa within the same cluster, value between 0 and 1, DEFAULT = 0.5

effect.size

Vector giving the size of genetic effect to try

plot

boolean, if plot generation is required, DEFAULT = TRUE

Value

A data.frame with three columns, giving the Taxa ID, the effect.size and the corresponding heritability