Compute microbiomes for all individuals of current generation gathering all relevant object already computed.

Usage

compute_current_microbiome(
  beta,
  current_genotypes,
  mother_microbiomes,
  mean_microbiome,
  noise = 0.1,
  taxa_scale,
  lambda = 0.5,
  dir = F,
  thetaX
)

Arguments

lambda: proportion of microbiome of offspring coming from vertical transmission, DEFAULT = 0.5
dir: bool
thetaX: if environmental effect